Jiang Y, Chiu CY, Yan Q, Chen W, Gorin MB, Conley YP, Lakhal-Chaieb ML, Cook RJ, Amos CI, Wilson AF, Bailey-Wilson JE, McMahon FJ, Vazquez AI, Yuan A, Zhong X, Xiong M, Weeks DE, Fan R. Gene-Based Association Testing of Dichotomous Traits With Generalized Functional Linear Mixed Models Using Extended Pedigrees: Applications to Age-Related Macular Degeneration. Journal of the American Statistical Association. 2021;116(534):531-545. PubMed PMID: 34321704; PubMed Central PMCID: PMC8315575; DOI: 10.1080/01621459.2020.1799809.

Musolf AM, Simpson CL, Moiz BA, Pikielny CW, Middlebrooks CD, Mandal D, de Andrade M, Cole MD, Gaba C, Yang P, You M, Li Y, Kupert EY, Anderson MW, Schwartz AG, Pinney SM, Amos CI, Bailey-Wilson JE. Genetic Variation and Recurrent Haplotypes on Chromosome 6q23-25 Risk Locus in Familial Lung Cancer. Cancer research. 2021 June 15;81(12):3162-3173. PubMed PMID: 33853833; PubMed Central PMCID: PMC8409178; DOI: 10.1158/0008-5472.CAN-20-3196.

Liu Y, Xia J, McKay J, Tsavachidis S, Xiao X, Spitz MR, Cheng C, Byun J, Hong W, Li Y, Zhu D, Song Z, Rosenberg SM, Scheurer ME, Kheradmand F, Pikielny CW, Lusk CM, Schwartz AG, Wistuba II, Cho MH, Silverman EK, Bailey-Wilson J, Pinney SM, Anderson M, Kupert E, Gaba C, Mandal D, You M, de Andrade M, Yang P, Liloglou T, Davies MPA, Lissowska J, Swiatkowska B, Zaridze D, Mukeria A, Janout V, Holcatova I, Mates D, Stojsic J, Scelo G, Brennan P, Liu G, Field JK, Hung RJ, Christiani DC, Amos CI. Rare deleterious germline variants and risk of lung cancer. NPJ Precis Oncol. 2021 Feb 16;5(1):12. doi: 10.1038/s41698-021-00146-7. PMID: 33594163.

Byun J, Han Y, Li Y, Xia J, Xiao X, Sun R, Walsh KM, Gorlov I, Gorlova O, Zhou W, Pettit RW. Trans-ethnic genome-wide meta-analysis of 35,732 cases and 34,424 controls identifies novel genomic cross-ancestry loci contributing to lung cancer susceptibility. medRxiv. 2020 Jan 1.

Musolf AM, Moiz BA, Sun H, Pikielny CW, Bossé Y, Mandal D, de Andrade M, Gaba C, Yang P, Li Y, You M, Govindan R, Wilson RK, Kupert EY, Anderson MW, Schwartz AG, Pinney SM, Amos CI, Bailey-Wilson JE. Whole Exome Sequencing of Highly Aggregated Lung Cancer Families Reveals Linked Loci for Increased Cancer Risk on Chromosomes 12q, 7p, and 4q. Cancer Epidemiol Biomarkers Prev. 2020 Feb;29(2):434-442. doi: 10.1158/1055-9965.EPI-19-0887. Epub 2019 Dec 11. PMID: 31826912

Liu Y, Lusk CM, Cho MH, Silverman EK, Qiao D, Zhang R, Scheurer ME, Kheradmand F, Wheeler DA, Tsavachidis S, Armstrong G, Zhu D, Wistuba II, Chow CB, Behrens C, Pikielny CW, Neslund-Dudas C, Pinney SM, Anderson M, Kupert E, Bailey-Wilson J, Gaba C, Mandal D, You M, de Andrade M, Yang P, Field JK, Liloglou T, Davies M, Lissowska J, Swiatkowska B, Zaridze D, Mukeriya A, Janout V, Holcatova I, Mates D, Milosavljevic S, Scelo G, Brennan P, McKay J, Liu G, Hung RJ; COPDGene Investigators, Christiani DC, Schwartz AG, Amos CI, Spitz MR. Rare Variants in Known Susceptibility Loci and Their Contribution to Risk of Lung Cancer. J Thorac Oncol. 2018 Jul 4. pii: S1556-0864(18)30767-6. doi: 10.1016/j.jtho.2018.06.016. PMID: 29981437

Byun J, Schwartz AG, Lusk C, Wenzlaff AS, de Andrade M, Mandal D, Gaba C, Yang P, You M, Kupert EY, Anderson MW, Han Y, Li Y, Qian D, Stilp A, Laurie C, Nelson S, Zheng W, Hung RJ, Gaborieau V, Mckay J, Brennan P, Caporaso NE, Landi MT, Wu X, McLaughlin JR, Brhane Y, Bossé Y, Pinney SM, Bailey-Wilson JE, Amos CI. Genome-Wide Association Study of Familial Lung Cancer.Carcinogenesis. 2018 Jun 19. doi: 10.1093/carcin/bgy080. PMID: 29924316

Musolf AM, Simpson CL, de Andrade M, Mandal D, Gaba C, Yang P, Li Y, You M, Kupert EY, Anderson MW, Schwartz AG, Pinney SM, Amos CI, Bailey-Wilson JE. Parametric Linkage Analysis Identifies Five Novel Genome-Wide Significant Loci for Familial Lung Cancer. Hum Hered. 2016;82(1-2):64-74. doi: 10.1159/000479028. Epub 2017 Aug 18.

Liu Y, Kheradmand F, Davis CF, Scheurer ME, Wheeler D, Tsavachidis S, Armstrong G, Simpson C, Mandal D, Kupert E, Anderson M, You M, Xiong D, Pikielny C, Schwartz AG, Bailey-Wilson J, Gaba C, De Andrade M, Yang P, Pinney SM; Genetic Epidemiology of Lung Cancer Consortium, Amos CI, Spitz MR. Focused Analysis of Exome Sequencing Data for Rare Germline Mutations in Familial and Sporadic Lung Cancer. J Thorac Oncol. 2016 Jan;11(1):52-61. doi: 10.1016/j.jtho.2015.09.015. PMID: 26762739; PMCID: PMC4714038.

Fang S, Pinney SM, Bailey-Wilson JE, de Andrade M, Li Y, Kupert E, You M, Schwartz AG, Yang P, Anderson M, Amos CI. Ordered subset analysis identifies loci influencing lung cancer risk on chromosomes 6q and 12q. Cancer Epidemiol Biomarkers Prev. e-Pub 10/2010.

Liu P, Yang P, Wu X, Vikis HG, Lu Y, Wang Y, Schwartz AG, Pinney SM, de Andrade M, Gazdar A, Gaba C, Mandal D, Lee J, Kupert E, Seminara D, Minna J, Bailey-Wilson JE, Spitz M, Amos CI, Anderson MW, You M. A second genetic variant on chromosome 15q24-25.1 associates with lung cancer. Cancer Res 70(8):3128-35, 4/2010.

Amos CI, Pinney SM, Li Y, Kupert E, Lee J, de Andrade MA, Yang P, Schwartz AG, Fain PR, Gazdar A, Minna J, Wiest JS, Zeng D, Rothschild H, Mandal D, You M, Coons T, Gaba C, Bailey-Wilson JE, Anderson MW. A Susceptibility Locus on Chromosome 6q Greatly Increases Lung Cancer Risk among Light and Never Smokers. Cancer Res 70(6):2359-67, 3/2010. e-Pub 3/2010. PMCID: PMC2855643

Liu P, Vikis HG, Lu Y, Wang Y, Schwartz AG, Pinney SM, Yang P, de Andrade M, Gazdar A, Gaba C, Mandal D, Lee J, Kupert E, Seminara D, Minna J, Bailey-Wilson JE, Amos CI, Anderson MW, You M. Cumulative effect of multiple Loci on genetic susceptibility to familial lung cancer. Cancer Epidemiol Biomarkers Prev 19(2):517-24, 2/2010.

Liu Y, Liu P, Wen W, James MA, Wang Y, Bailey-Wilson JE, Amos CI, Pinney SM, Yang P, de Andrade M, Petersen GM, Wiest JS, Fain PR, Schwartz AG, Gazdar A, Gaba C, Rothschild H, Mandal D, Kupert E, Lee J, Seminara D, Minna J, Anderson MW, You M. Haplotype and cell proliferation analyses of candidate lung cancer susceptibility genes on chromosome 15q24-25.1. Cancer Res 69(19):7844-50, 10/2009. e-Pub 9/2009.

You M, Wang D, Liu P, Vikis H, James M, Lu Y, Wang Y, Wang M, Chen Q, Jia D, Liu Y, Wen W, Yang P, Sun Z, Pinney SM, Zheng W, Shu XO, Long J, Gao YT, Xiang YB, Chow WH, Rothman N, Petersen GM, de Andrade M, Wu Y, Cunningham JM, Wiest JS, Fain PR, Schwartz AG, Girard L, Gazdar A, Gaba C, Rothschild H, Mandal D, Coons T, Lee J, Kupert E, Seminara D, Minna J, Bailey-Wilson JE, Amos CI, Anderson MW. Fine Mapping of Chromosome 6q23-25 Region in Familial Lung Cancer Families Reveals RGS17 as a Likely Candidate Gene. Clin Cancer Res 15(8):2666-74, 4/2009. e-Pub 4/2009.

Liu P, Vikis HG, Wang D, Lu Y, Wang Y, Schwartz AG, Pinney SM, Yang P, de Andrade M, Petersen GM, Wiest JS, Fain PR, Gazdar A, Gaba C, Rothschild H, Mandal D, Coons T, Lee J, Kupert E, Seminara D, Minna J, Bailey-Wilson JE, Wu X, Spitz MR, Eisen T, Houlston RS, Amos CI, Anderson MW, You M. Familial aggregation of common sequence variants on 15q24-25.1 in lung cancer. J Natl Cancer Inst 100(18):1326-30, 9/2008. e-Pub 9/2008. PMCID: PMC2538550.

Wang M, Vikis HG, Wang Y, Jia D, Wang D, Bierut LJ, Bailey-Wilson JE, Amos CI, Pinney SM, Petersen GM, de Andrade M, Yang P, Wiest JS, Fain PR, Schwartz AG, Gazdar A, Minna J, Gaba C, Rothschild H, Mandal D, Kupert E, Seminara D, Liu Y, Viswanathan A, Govindan R, Anderson MW, You M. Identification of a novel tumor suppressor gene p34 on human chromosome 6q25.1. Cancer Res 67(1):93-99, 2007.

Vikis H, Sato M, James M, Wang D, Wang Y, Wang M, Jia D, Liu Y, Bailey-Wilson JE, Amos CI, Pinney SM, Petersen GM, de Andrade M, Yang P, Wiest JS, Fain PR, Schwartz AG, Gazdar A, Gaba C, Rothschild H, Mandal D, Kupert E, Seminara D, Viswanathan A, Govindan R, Minna J, Anderson MW, You M. EGFR-T790M is a rare lung cancer susceptibility allele with enhanced kinase activity. Cancer Res 67(10):4665-70, 2007.

Bailey-Wilson JE*, Amos CI*, Pinney SM, Petersen GM, de Andrade M, Wiest JS, Fain P, Schwartz AG, You M, Franklin W, Klein C, Gazdar A, Rothschild H, Mandal D, Coons T, Slusser J, Lee J, Gaba C, Kupert E, Perez A, Zhou X, Zeng D, Liu Q, Zhang Q, Seminara D, Minna J, Anderson MW *Co-First Authors. A major lung cancer susceptibility locus maps to chromosome 6q23-25. Am J Hum Genet 75:460-74, 2004.

Chapters:

Christiani DC, Amos CI. Chapter 74: Lung Cancer: Epidemiology. Robert J. Mason & Arthur Slutsky & John F. Murray & Jay A. Nadel & Michael Gotway & V.Courtney Broaddus & Joel D Ernst & Talmadge E King, Jr & Kathleen F. Sarmiento (eds), Elsevier, In Press 2020

Schwartz AG, Baliey-Wilson JE, Amos CI. Genetic Susceptibility to Lung Cancer. In IASCLC Thoracic Oncology. Ed(s) Harvey Pass, David Ball, Giorgio Scagliotti, pp 46-51.

Abstracts:

Musolf AM, Simpson CL, Moiz BA, de Andrade M, Mandal D, Gaba C, Yang P, You M, Kupert EY, Anderson MW, Schwartz AG, Pinney SM, Amos CI, Bailey-Wilson, JE Abstract 37: Highly aggregated lung cancer families reveal a heterogeneous cause for a previous linkage signal on 6q. Proceedings: AACR Annual Meeting 2020; April 27-28, 2020 and June 22-24, 2020; Philadelphia, PA, 2020

Simpson CL, Green T, Doan B, Amos CI, Pinney SM, Kupert E, de Andrade M, Yang P, Schwartz AG, Fain PR, Gazdar A, Minna J, Wiest JS, Rothschild H, Mandal D, You M, Coons TA, Gaba C, Anderson MW, Bailey-Wilson JE.  Covariate-Based Linkage Analysis Of Lung Cancer Risk Reveals Novel Loci On 9p21 And 20q12, Genetic Epidemiology (36:2), Feb 2012, pp 131-131.

Simpson CL, Green T, Doan B, Amos CI, Pinney SM, Kupert EY, de Andrade M, Yang P, Schwartz AG, Fain PR, Gazdar A, Minna J, Wiest JS, Rothschild H, Mandal D, You M, Coons TA, Gaba C, Anderson MW, and Bailey-Wilson JE.  Fine-Mapping in a Covariate-based Genomewide Linkage Scan of Lung Cancer Susceptibility, Genetic Epidemiology (36:7), Nov 2012, pp 774-775.

Fang S, Pinney SM, Bailey-Wilson JE, de Andrade MA, Li Y, You M, Schwartz AG, Yang P, Anderson MW, Amos CI.  Ordered Subset Analysis Identifies Loci Influencing Lung Cancer Risk on Chromosomes 6q and 12q, Genetic Epidemiology (34:8), Dec 2010, pp 961-962

Presentations

Articles

J. Waldron, K.W. Termine, A.M. Musolf, M. de Andrade, C. Gaba, R. Govindan, P. Yang, M. You, M.W. Anderson, A.G. Schwartz, S.M. Pinney, C.I. Amos, J.E. Bailey-Wilson, D.M. Mandal. Identification of copy number variants in hereditary lung cancer families. The American Society of Human Genetics. Virtual Meeting. October 18-21st, 2021.